Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfrsf1aP25118 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Gm15165-201ENSMUST00000118140 502 ntBASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfrsf1aP25118 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfrsf1aP25118 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms