Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cbx3P23198 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cbx3P23198 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cbx3P23198 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.09□□□□□ -0.15
Cbx3P23198 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cbx3P23198 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cbx3P23198 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cbx3P23198 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cbx3P23198 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cbx3P23198 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cbx3P23198 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cbx3P23198 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cbx3P23198 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Cbx3P23198 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cbx3P23198 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cbx3P23198 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.08□□□□□ -0.16
Cbx3P23198 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cbx3P23198 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cbx3P23198 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cbx3P23198 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cbx3P23198 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cbx3P23198 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.07□□□□□ -0.16
Cbx3P23198 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.07□□□□□ -0.16
Cbx3P23198 Gm27275-201ENSMUST00000184318 272 ntBASIC14.07□□□□□ -0.16
Cbx3P23198 Gm4974-201ENSMUST00000209974 875 ntBASIC14.07□□□□□ -0.16
Cbx3P23198 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cbx3P23198 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cbx3P23198 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.06□□□□□ -0.16
Cbx3P23198 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.06□□□□□ -0.16
Cbx3P23198 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Gm42545-201ENSMUST00000202755 922 ntBASIC14.06□□□□□ -0.16
Cbx3P23198 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.06□□□□□ -0.16
Cbx3P23198 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.06□□□□□ -0.16
Cbx3P23198 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cbx3P23198 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cbx3P23198 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cbx3P23198 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cbx3P23198 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cbx3P23198 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.05□□□□□ -0.16
Cbx3P23198 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cbx3P23198 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.05□□□□□ -0.16
Cbx3P23198 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms