Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Gm25016-201ENSMUST00000158399 131 ntBASIC14.79□□□□□ -0.04
BdnfP21237 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.79□□□□□ -0.04
BdnfP21237 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.79□□□□□ -0.04
BdnfP21237 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BdnfP21237 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Gm45328-201ENSMUST00000210942 917 ntBASIC14.79□□□□□ -0.04
BdnfP21237 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.79□□□□□ -0.04
BdnfP21237 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BdnfP21237 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BdnfP21237 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.78□□□□□ -0.04
BdnfP21237 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
BdnfP21237 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.78□□□□□ -0.04
BdnfP21237 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
BdnfP21237 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.78□□□□□ -0.04
BdnfP21237 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.78□□□□□ -0.04
BdnfP21237 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BdnfP21237 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
BdnfP21237 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BdnfP21237 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Gm15794-201ENSMUST00000120182 631 ntBASIC14.77□□□□□ -0.05
BdnfP21237 AA414768-201ENSMUST00000121924 1257 ntBASIC14.77□□□□□ -0.05
BdnfP21237 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
BdnfP21237 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Gm7367-201ENSMUST00000057611 492 ntBASIC14.77□□□□□ -0.05
BdnfP21237 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BdnfP21237 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
BdnfP21237 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
BdnfP21237 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.77□□□□□ -0.05
BdnfP21237 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BdnfP21237 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BdnfP21237 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Gm13836-201ENSMUST00000121159 501 ntBASIC14.76□□□□□ -0.05
BdnfP21237 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.76□□□□□ -0.05
BdnfP21237 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.76□□□□□ -0.05
BdnfP21237 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.76□□□□□ -0.05
BdnfP21237 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BdnfP21237 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BdnfP21237 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BdnfP21237 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BdnfP21237 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms