Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rb1P13405 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.79■□□□□ 0.12
Rb1P13405 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.79■□□□□ 0.12
Rb1P13405 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Rb1P13405 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rb1P13405 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Rb1P13405 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.78■□□□□ 0.12
Rb1P13405 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.78■□□□□ 0.12
Rb1P13405 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.78■□□□□ 0.12
Rb1P13405 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rb1P13405 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.78■□□□□ 0.12
Rb1P13405 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.78■□□□□ 0.12
Rb1P13405 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.78■□□□□ 0.12
Rb1P13405 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Rb1P13405 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rb1P13405 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.78■□□□□ 0.12
Rb1P13405 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rb1P13405 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rb1P13405 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rb1P13405 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.77■□□□□ 0.12
Rb1P13405 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rb1P13405 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.77■□□□□ 0.12
Rb1P13405 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.77■□□□□ 0.12
Rb1P13405 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rb1P13405 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rb1P13405 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rb1P13405 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rb1P13405 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rb1P13405 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rb1P13405 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rb1P13405 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Rb1P13405 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.76■□□□□ 0.11
Rb1P13405 Gm27628-201ENSMUST00000184911 107 ntBASIC15.76■□□□□ 0.11
Rb1P13405 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.76■□□□□ 0.11
Rb1P13405 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.76■□□□□ 0.11
Rb1P13405 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rb1P13405 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms