Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ccl3P10855 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccl3P10855 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccl3P10855 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ccl3P10855 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccl3P10855 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccl3P10855 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.58□□□□□ -0.24
Ccl3P10855 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.58□□□□□ -0.24
Ccl3P10855 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccl3P10855 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccl3P10855 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccl3P10855 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccl3P10855 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccl3P10855 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.58□□□□□ -0.24
Ccl3P10855 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccl3P10855 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl3P10855 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccl3P10855 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.57□□□□□ -0.24
Ccl3P10855 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccl3P10855 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccl3P10855 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl3P10855 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl3P10855 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccl3P10855 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccl3P10855 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccl3P10855 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccl3P10855 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.56□□□□□ -0.24
Ccl3P10855 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccl3P10855 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.56□□□□□ -0.24
Ccl3P10855 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl3P10855 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ccl3P10855 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccl3P10855 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccl3P10855 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ccl3P10855 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms