Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl1P10146 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ccl1P10146 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccl1P10146 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12□□□□□ -0.49
Ccl1P10146 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12□□□□□ -0.49
Ccl1P10146 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Gm10602-201ENSMUST00000098239 609 ntBASIC12□□□□□ -0.49
Ccl1P10146 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl1P10146 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Gm38577-201ENSMUST00000221531 4545 ntBASIC12□□□□□ -0.49
Ccl1P10146 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl1P10146 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl1P10146 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Ccl1P10146 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.99□□□□□ -0.49
Ccl1P10146 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccl1P10146 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Gm11539-201ENSMUST00000119837 557 ntBASIC11.99□□□□□ -0.49
Ccl1P10146 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.99□□□□□ -0.49
Ccl1P10146 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl1P10146 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ccl1P10146 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccl1P10146 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.99□□□□□ -0.49
Ccl1P10146 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl1P10146 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccl1P10146 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccl1P10146 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl1P10146 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.98□□□□□ -0.49
Ccl1P10146 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccl1P10146 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl1P10146 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccl1P10146 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Gm12134-201ENSMUST00000122109 520 ntBASIC11.98□□□□□ -0.49
Ccl1P10146 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.98□□□□□ -0.49
Ccl1P10146 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccl1P10146 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl1P10146 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.98□□□□□ -0.49
Ccl1P10146 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms