Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UbbP0CG49 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 BC037039-201ENSMUST00000192003 2205 ntBASIC13.43□□□□□ -0.26
UbbP0CG49 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
UbbP0CG49 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.43□□□□□ -0.26
UbbP0CG49 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
UbbP0CG49 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UbbP0CG49 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UbbP0CG49 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
UbbP0CG49 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UbbP0CG49 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.42□□□□□ -0.26
UbbP0CG49 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.42□□□□□ -0.26
UbbP0CG49 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
UbbP0CG49 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.42□□□□□ -0.26
UbbP0CG49 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.42□□□□□ -0.26
UbbP0CG49 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.42□□□□□ -0.26
UbbP0CG49 Gm43799-201ENSMUST00000201845 579 ntBASIC13.42□□□□□ -0.26
UbbP0CG49 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.42□□□□□ -0.26
UbbP0CG49 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
UbbP0CG49 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.42□□□□□ -0.26
UbbP0CG49 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UbbP0CG49 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UbbP0CG49 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.41□□□□□ -0.26
UbbP0CG49 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.41□□□□□ -0.26
UbbP0CG49 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.41□□□□□ -0.26
UbbP0CG49 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
UbbP0CG49 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.41□□□□□ -0.26
UbbP0CG49 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.41□□□□□ -0.26
UbbP0CG49 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.41□□□□□ -0.26
UbbP0CG49 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.41□□□□□ -0.26
UbbP0CG49 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
UbbP0CG49 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.41□□□□□ -0.26
UbbP0CG49 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UbbP0CG49 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.4□□□□□ -0.26
UbbP0CG49 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.4□□□□□ -0.26
UbbP0CG49 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
UbbP0CG49 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms