Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TnfP06804 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TnfP06804 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TnfP06804 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TnfP06804 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TnfP06804 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TnfP06804 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TnfP06804 App-207ENSMUST00000227737 2827 ntBASIC16.33■□□□□ 0.21
TnfP06804 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TnfP06804 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TnfP06804 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TnfP06804 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TnfP06804 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Gm45747-201ENSMUST00000212203 999 ntBASIC16.33■□□□□ 0.2
TnfP06804 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TnfP06804 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TnfP06804 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TnfP06804 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TnfP06804 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TnfP06804 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.32■□□□□ 0.2
TnfP06804 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TnfP06804 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.32■□□□□ 0.2
TnfP06804 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TnfP06804 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TnfP06804 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TnfP06804 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.32■□□□□ 0.2
TnfP06804 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TnfP06804 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.32■□□□□ 0.2
TnfP06804 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TnfP06804 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TnfP06804 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TnfP06804 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.31■□□□□ 0.2
TnfP06804 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TnfP06804 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.31■□□□□ 0.2
TnfP06804 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TnfP06804 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TnfP06804 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TnfP06804 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TnfP06804 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.3■□□□□ 0.2
TnfP06804 Gm12008-201ENSMUST00000117791 755 ntBASIC16.3■□□□□ 0.2
TnfP06804 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.3■□□□□ 0.2
TnfP06804 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Gm27301-201ENSMUST00000184012 127 ntBASIC16.3■□□□□ 0.2
TnfP06804 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.3■□□□□ 0.2
TnfP06804 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TnfP06804 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TnfP06804 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
TnfP06804 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.3■□□□□ 0.2
TnfP06804 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
TnfP06804 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TnfP06804 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms