Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Gm14140-201ENSMUST00000119999 995 ntBASIC13.73□□□□□ -0.21
P06344 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.73□□□□□ -0.21
P06344 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.73□□□□□ -0.21
P06344 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.73□□□□□ -0.21
P06344 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.73□□□□□ -0.21
P06344 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
P06344 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
P06344 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06344 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P06344 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.72□□□□□ -0.21
P06344 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.72□□□□□ -0.21
P06344 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.72□□□□□ -0.21
P06344 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P06344 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P06344 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.72□□□□□ -0.21
P06344 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06344 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.71□□□□□ -0.21
P06344 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
P06344 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.71□□□□□ -0.21
P06344 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
P06344 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.71□□□□□ -0.21
P06344 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.71□□□□□ -0.21
P06344 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.71□□□□□ -0.21
P06344 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.71□□□□□ -0.21
P06344 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
P06344 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06344 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
P06344 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
P06344 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06344 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P06344 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06344 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
P06344 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.71□□□□□ -0.22
P06344 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P06344 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06344 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P06344 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P06344 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06344 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06344 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06344 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms