Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.8□□□□□ -0.04
P04213 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
P04213 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.8□□□□□ -0.04
P04213 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
P04213 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.8□□□□□ -0.04
P04213 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
P04213 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
P04213 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
P04213 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
P04213 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
P04213 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Gm8344-201ENSMUST00000119813 856 ntBASIC14.79□□□□□ -0.04
P04213 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.79□□□□□ -0.04
P04213 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
P04213 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.79□□□□□ -0.04
P04213 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
P04213 Efs-202ENSMUST00000227037 2540 ntBASIC14.79□□□□□ -0.04
P04213 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
P04213 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.79□□□□□ -0.04
P04213 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
P04213 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P04213 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P04213 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
P04213 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.78□□□□□ -0.04
P04213 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
P04213 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.78□□□□□ -0.04
P04213 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.78□□□□□ -0.04
P04213 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Gm18669-201ENSMUST00000216049 778 ntBASIC14.78□□□□□ -0.04
P04213 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.78□□□□□ -0.04
P04213 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.78□□□□□ -0.04
P04213 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.78□□□□□ -0.04
P04213 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
P04213 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
P04213 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.77□□□□□ -0.04
P04213 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.77□□□□□ -0.04
P04213 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
P04213 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
P04213 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04213 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.77□□□□□ -0.05
P04213 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04213 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
P04213 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.77□□□□□ -0.05
P04213 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.77□□□□□ -0.05
P04213 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms