Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Setdb1O88974 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Setdb1O88974 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Setdb1O88974 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.78■□□□□ 0.6
Setdb1O88974 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Setdb1O88974 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Setdb1O88974 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Setdb1O88974 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.78■□□□□ 0.6
Setdb1O88974 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Setdb1O88974 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.78■□□□□ 0.6
Setdb1O88974 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.78■□□□□ 0.6
Setdb1O88974 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.78■□□□□ 0.6
Setdb1O88974 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.78■□□□□ 0.6
Setdb1O88974 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.78■□□□□ 0.6
Setdb1O88974 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Setdb1O88974 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Setdb1O88974 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.77■□□□□ 0.6
Setdb1O88974 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.77■□□□□ 0.6
Setdb1O88974 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.77■□□□□ 0.6
Setdb1O88974 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.77■□□□□ 0.6
Setdb1O88974 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Setdb1O88974 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Setdb1O88974 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Setdb1O88974 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Setdb1O88974 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Setdb1O88974 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Setdb1O88974 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Setdb1O88974 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.76■□□□□ 0.59
Setdb1O88974 Gm13823-201ENSMUST00000119930 345 ntBASIC18.76■□□□□ 0.59
Setdb1O88974 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.76■□□□□ 0.59
Setdb1O88974 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Setdb1O88974 Rpph1-201ENSMUST00000175096 319 ntBASIC18.76■□□□□ 0.59
Setdb1O88974 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.76■□□□□ 0.59
Setdb1O88974 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.76■□□□□ 0.59
Setdb1O88974 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Setdb1O88974 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Setdb1O88974 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.76■□□□□ 0.59
Setdb1O88974 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.76■□□□□ 0.59
Setdb1O88974 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.76■□□□□ 0.59
Setdb1O88974 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Setdb1O88974 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Setdb1O88974 Grk6-207ENSMUST00000225925 2769 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Gm7774-201ENSMUST00000200064 533 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.75■□□□□ 0.59
Setdb1O88974 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Gm2423-201ENSMUST00000074863 733 ntBASIC18.75■□□□□ 0.59
Setdb1O88974 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Setdb1O88974 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.75■□□□□ 0.59
Setdb1O88974 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms