Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.05■□□□□ -0
ClppO88696 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ClppO88696 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ClppO88696 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.04■□□□□ -0
ClppO88696 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ClppO88696 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.04■□□□□ -0
ClppO88696 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Gm11764-201ENSMUST00000120221 623 ntBASIC15.04■□□□□ -0
ClppO88696 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.04■□□□□ -0
ClppO88696 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.04■□□□□ -0
ClppO88696 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ClppO88696 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ClppO88696 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ClppO88696 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.04■□□□□ -0
ClppO88696 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
ClppO88696 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ClppO88696 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.04■□□□□ -0
ClppO88696 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.03■□□□□ -0
ClppO88696 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ClppO88696 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Gm15467-201ENSMUST00000120582 445 ntBASIC15.03■□□□□ -0
ClppO88696 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.03■□□□□ -0
ClppO88696 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ClppO88696 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.03■□□□□ -0
ClppO88696 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.03■□□□□ -0
ClppO88696 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.03■□□□□ -0
ClppO88696 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.03■□□□□ -0
ClppO88696 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.03■□□□□ -0
ClppO88696 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
ClppO88696 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ClppO88696 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ClppO88696 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
ClppO88696 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
ClppO88696 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Gm13036-201ENSMUST00000117799 748 ntBASIC15.02■□□□□ -0
ClppO88696 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.02■□□□□ -0
ClppO88696 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.02■□□□□ -0
ClppO88696 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Gm2213-201ENSMUST00000197485 688 ntBASIC15.02■□□□□ -0
ClppO88696 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.02■□□□□ -0
ClppO88696 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ClppO88696 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ClppO88696 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms