Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cops3O88543 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops3O88543 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cops3O88543 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cops3O88543 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cops3O88543 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.82□□□□□ -0.2
Cops3O88543 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cops3O88543 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cops3O88543 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.82□□□□□ -0.2
Cops3O88543 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.82□□□□□ -0.2
Cops3O88543 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.82□□□□□ -0.2
Cops3O88543 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.82□□□□□ -0.2
Cops3O88543 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cops3O88543 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cops3O88543 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.82□□□□□ -0.2
Cops3O88543 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops3O88543 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops3O88543 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops3O88543 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Cops3O88543 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cops3O88543 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cops3O88543 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Gm5587-201ENSMUST00000206270 674 ntBASIC13.81□□□□□ -0.2
Cops3O88543 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cops3O88543 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops3O88543 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.81□□□□□ -0.2
Cops3O88543 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops3O88543 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Cops3O88543 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.8□□□□□ -0.2
Cops3O88543 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms