Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacna1hO88427 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1hO88427 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Gm16570-201ENSMUST00000161951 436 ntBASIC14.9□□□□□ -0.02
Cacna1hO88427 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.9□□□□□ -0.02
Cacna1hO88427 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1hO88427 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.89□□□□□ -0.03
Cacna1hO88427 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Cacna1hO88427 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.89□□□□□ -0.03
Cacna1hO88427 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1hO88427 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1hO88427 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1hO88427 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.89□□□□□ -0.03
Cacna1hO88427 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.89□□□□□ -0.03
Cacna1hO88427 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.88□□□□□ -0.03
Cacna1hO88427 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1hO88427 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1hO88427 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.88□□□□□ -0.03
Cacna1hO88427 Gm17420-201ENSMUST00000164753 153 ntBASIC14.88□□□□□ -0.03
Cacna1hO88427 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cacna1hO88427 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1hO88427 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm12176-201ENSMUST00000121420 875 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms