Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tnnt1O88346 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnnt1O88346 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Tnnt1O88346 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tnnt1O88346 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnnt1O88346 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tnnt1O88346 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.67■□□□□ 0.74
Tnnt1O88346 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnnt1O88346 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 App-207ENSMUST00000227737 2827 ntBASIC19.66■□□□□ 0.74
Tnnt1O88346 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.66■□□□□ 0.74
Tnnt1O88346 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.66■□□□□ 0.74
Tnnt1O88346 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.66■□□□□ 0.74
Tnnt1O88346 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm18246-201ENSMUST00000221023 728 ntBASIC19.66■□□□□ 0.74
Tnnt1O88346 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.66■□□□□ 0.74
Tnnt1O88346 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
Tnnt1O88346 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tnnt1O88346 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnnt1O88346 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
Tnnt1O88346 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnnt1O88346 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnnt1O88346 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnnt1O88346 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Tnnt1O88346 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnnt1O88346 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnnt1O88346 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.64■□□□□ 0.74
Tnnt1O88346 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.64■□□□□ 0.73
Tnnt1O88346 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms