Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10139O88245 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Gm10139O88245 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Gm10139O88245 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC9.41□□□□□ -0.9
Gm10139O88245 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Gm10139O88245 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Gm10139O88245 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Gm10139O88245 Gm9768-201ENSMUST00000206007 2861 ntBASIC9.4□□□□□ -0.9
Gm10139O88245 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Gm10139O88245 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.4□□□□□ -0.9
Gm10139O88245 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC9.4□□□□□ -0.9
Gm10139O88245 Gm12497-201ENSMUST00000138778 237 ntBASIC9.4□□□□□ -0.9
Gm10139O88245 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Gm10139O88245 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Gm10139O88245 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Gm10139O88245 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.4□□□□□ -0.9
Gm10139O88245 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.4□□□□□ -0.9
Gm10139O88245 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.4□□□□□ -0.9
Gm10139O88245 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Gm18622-201ENSMUST00000219361 595 ntBASIC9.4□□□□□ -0.9
Gm10139O88245 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Gm37728-201ENSMUST00000195025 2292 ntBASIC9.4□□□□□ -0.9
Gm10139O88245 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Gm10139O88245 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Gm10139O88245 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
Gm10139O88245 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Gm10139O88245 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Gm10139O88245 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Gm10139O88245 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.39□□□□□ -0.91
Gm10139O88245 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm10139O88245 Gm25745-201ENSMUST00000174945 133 ntBASIC9.39□□□□□ -0.91
Gm10139O88245 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm10139O88245 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Gm10139O88245 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms