Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col5a1O88207 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Col5a1O88207 Gm13453-201ENSMUST00000118708 357 ntBASIC13.78□□□□□ -0.2
Col5a1O88207 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.78□□□□□ -0.2
Col5a1O88207 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Mir6420-201ENSMUST00000185032 102 ntBASIC13.78□□□□□ -0.2
Col5a1O88207 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.78□□□□□ -0.2
Col5a1O88207 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.78□□□□□ -0.2
Col5a1O88207 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Syt7-205ENSMUST00000224135 1557 ntBASIC13.78□□□□□ -0.2
Col5a1O88207 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Gm6973-201ENSMUST00000117080 721 ntBASIC13.78□□□□□ -0.2
Col5a1O88207 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col5a1O88207 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Col5a1O88207 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col5a1O88207 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Col5a1O88207 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Col5a1O88207 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.77□□□□□ -0.2
Col5a1O88207 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Col5a1O88207 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col5a1O88207 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.77□□□□□ -0.21
Col5a1O88207 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col5a1O88207 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.77□□□□□ -0.21
Col5a1O88207 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Gm44719-201ENSMUST00000206404 149 ntBASIC13.77□□□□□ -0.21
Col5a1O88207 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.77□□□□□ -0.21
Col5a1O88207 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col5a1O88207 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col5a1O88207 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col5a1O88207 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm15487-201ENSMUST00000122373 465 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.76□□□□□ -0.21
Col5a1O88207 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.76□□□□□ -0.21
Col5a1O88207 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Dancr-204ENSMUST00000132389 2347 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.76□□□□□ -0.21
Col5a1O88207 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Col5a1O88207 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm18737-201ENSMUST00000173594 937 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.76□□□□□ -0.21
Col5a1O88207 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm27989-201ENSMUST00000184721 107 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col5a1O88207 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col5a1O88207 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.76□□□□□ -0.21
Col5a1O88207 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms