Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Vamp4O70480 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.39■□□□□ 0.69
Vamp4O70480 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Vamp4O70480 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.39■□□□□ 0.69
Vamp4O70480 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.39■□□□□ 0.69
Vamp4O70480 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.39■□□□□ 0.69
Vamp4O70480 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.39■□□□□ 0.69
Vamp4O70480 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Vamp4O70480 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Vamp4O70480 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vamp4O70480 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Vamp4O70480 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.39■□□□□ 0.69
Vamp4O70480 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vamp4O70480 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Vamp4O70480 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.38■□□□□ 0.69
Vamp4O70480 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Vamp4O70480 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Gm12260-201ENSMUST00000122447 411 ntBASIC19.38■□□□□ 0.69
Vamp4O70480 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.38■□□□□ 0.69
Vamp4O70480 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.38■□□□□ 0.69
Vamp4O70480 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Vamp4O70480 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vamp4O70480 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Vamp4O70480 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.37■□□□□ 0.69
Vamp4O70480 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vamp4O70480 Gm15467-201ENSMUST00000120582 445 ntBASIC19.37■□□□□ 0.69
Vamp4O70480 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.37■□□□□ 0.69
Vamp4O70480 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.37■□□□□ 0.69
Vamp4O70480 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Vamp4O70480 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.37■□□□□ 0.69
Vamp4O70480 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vamp4O70480 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vamp4O70480 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Vamp4O70480 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Gm14494-201ENSMUST00000118786 435 ntBASIC19.36■□□□□ 0.69
Vamp4O70480 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Gm5264-201ENSMUST00000190584 848 ntBASIC19.36■□□□□ 0.69
Vamp4O70480 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vamp4O70480 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Vamp4O70480 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.36■□□□□ 0.69
Vamp4O70480 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vamp4O70480 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.35■□□□□ 0.69
Vamp4O70480 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.35■□□□□ 0.69
Vamp4O70480 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.35■□□□□ 0.69
Vamp4O70480 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vamp4O70480 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vamp4O70480 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms