Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
Mmp8O70138 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.77■□□□□ 0.6
Mmp8O70138 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Mmp8O70138 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.77■□□□□ 0.6
Mmp8O70138 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp8O70138 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Mmp8O70138 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp8O70138 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp8O70138 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp8O70138 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp8O70138 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mmp8O70138 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.76■□□□□ 0.59
Mmp8O70138 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Mmp8O70138 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.76■□□□□ 0.59
Mmp8O70138 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.76■□□□□ 0.59
Mmp8O70138 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Mmp8O70138 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp8O70138 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.76■□□□□ 0.59
Mmp8O70138 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.75■□□□□ 0.59
Mmp8O70138 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.75■□□□□ 0.59
Mmp8O70138 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.75■□□□□ 0.59
Mmp8O70138 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Gm1401-201ENSMUST00000122048 772 ntBASIC18.75■□□□□ 0.59
Mmp8O70138 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
Mmp8O70138 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.75■□□□□ 0.59
Mmp8O70138 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp8O70138 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Mmp8O70138 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Mmp8O70138 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.74■□□□□ 0.59
Mmp8O70138 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.74■□□□□ 0.59
Mmp8O70138 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.74■□□□□ 0.59
Mmp8O70138 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.74■□□□□ 0.59
Mmp8O70138 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Mmp8O70138 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.74■□□□□ 0.59
Mmp8O70138 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp8O70138 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp8O70138 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mmp8O70138 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Mmp8O70138 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.73■□□□□ 0.59
Mmp8O70138 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.73■□□□□ 0.59
Mmp8O70138 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mmp8O70138 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms