Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.5□□□□□ -0.57
Rpl35aO55142 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.5□□□□□ -0.57
Rpl35aO55142 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm11780-201ENSMUST00000136880 516 ntBASIC11.49□□□□□ -0.57
Rpl35aO55142 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm6089-201ENSMUST00000197666 938 ntBASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.49□□□□□ -0.57
Rpl35aO55142 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.49□□□□□ -0.57
Rpl35aO55142 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rpl35aO55142 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm8344-201ENSMUST00000119813 856 ntBASIC11.48□□□□□ -0.57
Rpl35aO55142 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.48□□□□□ -0.57
Rpl35aO55142 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.48□□□□□ -0.57
Rpl35aO55142 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.48□□□□□ -0.57
Rpl35aO55142 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rpl35aO55142 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms