Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.32□□□□□ -0.12
BckdkO55028 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
BckdkO55028 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BckdkO55028 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.31□□□□□ -0.12
BckdkO55028 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
BckdkO55028 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BckdkO55028 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Mir5131-201ENSMUST00000175426 93 ntBASIC14.31□□□□□ -0.12
BckdkO55028 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.31□□□□□ -0.12
BckdkO55028 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.31□□□□□ -0.12
BckdkO55028 Gm7506-201ENSMUST00000207758 815 ntBASIC14.31□□□□□ -0.12
BckdkO55028 AW822252-206ENSMUST00000208904 237 ntBASIC14.31□□□□□ -0.12
BckdkO55028 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
BckdkO55028 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.31□□□□□ -0.12
BckdkO55028 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.31□□□□□ -0.12
BckdkO55028 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BckdkO55028 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BckdkO55028 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
BckdkO55028 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.3□□□□□ -0.12
BckdkO55028 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.3□□□□□ -0.12
BckdkO55028 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
BckdkO55028 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BckdkO55028 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BckdkO55028 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.29□□□□□ -0.12
BckdkO55028 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.29□□□□□ -0.12
BckdkO55028 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BckdkO55028 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.29□□□□□ -0.12
BckdkO55028 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.29□□□□□ -0.12
BckdkO55028 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BckdkO55028 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
BckdkO55028 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
BckdkO55028 Gm25990-201ENSMUST00000102440 86 ntBASIC14.28□□□□□ -0.12
BckdkO55028 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
BckdkO55028 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
BckdkO55028 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.28□□□□□ -0.12
BckdkO55028 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.28□□□□□ -0.12
BckdkO55028 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BckdkO55028 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.28□□□□□ -0.12
BckdkO55028 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms