Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Gm18737-201ENSMUST00000173594 937 ntBASIC14.86□□□□□ -0.03
Cacna1bO55017 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.86□□□□□ -0.03
Cacna1bO55017 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1bO55017 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Gm13453-201ENSMUST00000118708 357 ntBASIC14.85□□□□□ -0.03
Cacna1bO55017 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Gm10253-201ENSMUST00000194270 940 ntBASIC14.85□□□□□ -0.03
Cacna1bO55017 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.85□□□□□ -0.03
Cacna1bO55017 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1bO55017 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1bO55017 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.84□□□□□ -0.03
Cacna1bO55017 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.84□□□□□ -0.03
Cacna1bO55017 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1bO55017 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1bO55017 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1bO55017 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1bO55017 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.83□□□□□ -0.03
Cacna1bO55017 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cacna1bO55017 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1bO55017 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cacna1bO55017 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1bO55017 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1bO55017 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Gm9794-201ENSMUST00000202370 423 ntBASIC14.83□□□□□ -0.04
Cacna1bO55017 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.83□□□□□ -0.04
Cacna1bO55017 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1bO55017 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1bO55017 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1bO55017 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1bO55017 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1bO55017 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1bO55017 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1bO55017 Gm6912-201ENSMUST00000117218 544 ntBASIC14.82□□□□□ -0.04
Cacna1bO55017 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms