Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf13O54965 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Rnf13O54965 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf13O54965 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rnf13O54965 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf13O54965 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.99□□□□□ -0.17
Rnf13O54965 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.99□□□□□ -0.17
Rnf13O54965 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.99□□□□□ -0.17
Rnf13O54965 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf13O54965 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rnf13O54965 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.99□□□□□ -0.17
Rnf13O54965 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.99□□□□□ -0.17
Rnf13O54965 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf13O54965 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rnf13O54965 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.98□□□□□ -0.17
Rnf13O54965 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Gm18032-201ENSMUST00000222541 538 ntBASIC13.98□□□□□ -0.17
Rnf13O54965 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf13O54965 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf13O54965 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.97□□□□□ -0.17
Rnf13O54965 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf13O54965 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rnf13O54965 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Rnf13O54965 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rnf13O54965 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf13O54965 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms