Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
FxnO35943 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FxnO35943 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
FxnO35943 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
FxnO35943 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FxnO35943 Gm27357-201ENSMUST00000183754 135 ntBASIC14.4□□□□□ -0.1
FxnO35943 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.4□□□□□ -0.1
FxnO35943 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FxnO35943 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FxnO35943 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.4□□□□□ -0.1
FxnO35943 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FxnO35943 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FxnO35943 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FxnO35943 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
FxnO35943 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
FxnO35943 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.39□□□□□ -0.11
FxnO35943 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.39□□□□□ -0.11
FxnO35943 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.39□□□□□ -0.11
FxnO35943 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.39□□□□□ -0.11
FxnO35943 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.39□□□□□ -0.11
FxnO35943 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.39□□□□□ -0.11
FxnO35943 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 App-207ENSMUST00000227737 2827 ntBASIC14.39□□□□□ -0.11
FxnO35943 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.39□□□□□ -0.11
FxnO35943 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FxnO35943 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FxnO35943 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.38□□□□□ -0.11
FxnO35943 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FxnO35943 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.38□□□□□ -0.11
FxnO35943 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Gm15165-201ENSMUST00000118140 502 ntBASIC14.38□□□□□ -0.11
FxnO35943 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.38□□□□□ -0.11
FxnO35943 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.38□□□□□ -0.11
FxnO35943 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.38□□□□□ -0.11
FxnO35943 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.38□□□□□ -0.11
FxnO35943 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.38□□□□□ -0.11
FxnO35943 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FxnO35943 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms