Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.29□□□□□ -0.12
Capn1O35350 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.29□□□□□ -0.12
Capn1O35350 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.29□□□□□ -0.12
Capn1O35350 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.29□□□□□ -0.12
Capn1O35350 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.29□□□□□ -0.12
Capn1O35350 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Capn1O35350 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
Capn1O35350 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Capn1O35350 Gm15467-201ENSMUST00000120582 445 ntBASIC14.28□□□□□ -0.12
Capn1O35350 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Capn1O35350 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.28□□□□□ -0.12
Capn1O35350 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.28□□□□□ -0.12
Capn1O35350 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.28□□□□□ -0.12
Capn1O35350 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.28□□□□□ -0.12
Capn1O35350 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.28□□□□□ -0.12
Capn1O35350 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.28□□□□□ -0.12
Capn1O35350 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Capn1O35350 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Capn1O35350 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Capn1O35350 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Capn1O35350 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.27□□□□□ -0.12
Capn1O35350 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.27□□□□□ -0.12
Capn1O35350 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Capn1O35350 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Capn1O35350 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.27□□□□□ -0.13
Capn1O35350 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Capn1O35350 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Capn1O35350 Gm7222-201ENSMUST00000117512 906 ntBASIC14.27□□□□□ -0.13
Capn1O35350 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Capn1O35350 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.27□□□□□ -0.13
Capn1O35350 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.27□□□□□ -0.13
Capn1O35350 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.27□□□□□ -0.13
Capn1O35350 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Capn1O35350 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Capn1O35350 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Capn1O35350 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Capn1O35350 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Capn1O35350 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.26□□□□□ -0.13
Capn1O35350 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.26□□□□□ -0.13
Capn1O35350 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Capn1O35350 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms