Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Alx4O35137 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.76□□□□□ -0.21
Alx4O35137 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Gm13312-201ENSMUST00000119631 718 ntBASIC13.76□□□□□ -0.21
Alx4O35137 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Gm6623-201ENSMUST00000173570 544 ntBASIC13.76□□□□□ -0.21
Alx4O35137 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.76□□□□□ -0.21
Alx4O35137 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.76□□□□□ -0.21
Alx4O35137 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Alx4O35137 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.76□□□□□ -0.21
Alx4O35137 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.76□□□□□ -0.21
Alx4O35137 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx4O35137 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Alx4O35137 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.75□□□□□ -0.21
Alx4O35137 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.75□□□□□ -0.21
Alx4O35137 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.75□□□□□ -0.21
Alx4O35137 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.75□□□□□ -0.21
Alx4O35137 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Alx4O35137 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx4O35137 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx4O35137 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Gm6433-201ENSMUST00000118634 875 ntBASIC13.74□□□□□ -0.21
Alx4O35137 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.74□□□□□ -0.21
Alx4O35137 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.74□□□□□ -0.21
Alx4O35137 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.74□□□□□ -0.21
Alx4O35137 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.74□□□□□ -0.21
Alx4O35137 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Alx4O35137 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.74□□□□□ -0.21
Alx4O35137 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Alx4O35137 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx4O35137 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx4O35137 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx4O35137 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms