Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.42□□□□□ -0.1
Scarb2O35114 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.42□□□□□ -0.1
Scarb2O35114 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.42□□□□□ -0.1
Scarb2O35114 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.42□□□□□ -0.1
Scarb2O35114 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb2O35114 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scarb2O35114 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scarb2O35114 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Scarb2O35114 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scarb2O35114 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.41□□□□□ -0.1
Scarb2O35114 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Gm12497-201ENSMUST00000138778 237 ntBASIC14.41□□□□□ -0.1
Scarb2O35114 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Scarb2O35114 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.41□□□□□ -0.1
Scarb2O35114 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb2O35114 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.41□□□□□ -0.1
Scarb2O35114 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Scarb2O35114 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Scarb2O35114 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.4□□□□□ -0.1
Scarb2O35114 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Scarb2O35114 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.4□□□□□ -0.1
Scarb2O35114 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.4□□□□□ -0.1
Scarb2O35114 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scarb2O35114 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb2O35114 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Scarb2O35114 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Scarb2O35114 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scarb2O35114 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb2O35114 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scarb2O35114 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scarb2O35114 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms