Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hps1O08983 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.34□□□□□ -0.11
Hps1O08983 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.34□□□□□ -0.11
Hps1O08983 Gm44450-201ENSMUST00000199528 114 ntBASIC14.34□□□□□ -0.11
Hps1O08983 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hps1O08983 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hps1O08983 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hps1O08983 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Hps1O08983 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.34□□□□□ -0.11
Hps1O08983 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hps1O08983 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.34□□□□□ -0.11
Hps1O08983 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hps1O08983 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Hps1O08983 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hps1O08983 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hps1O08983 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hps1O08983 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hps1O08983 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.33□□□□□ -0.11
Hps1O08983 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Hps1O08983 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Hps1O08983 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.33□□□□□ -0.12
Hps1O08983 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Hps1O08983 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.33□□□□□ -0.12
Hps1O08983 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.33□□□□□ -0.12
Hps1O08983 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hps1O08983 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hps1O08983 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hps1O08983 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.32□□□□□ -0.12
Hps1O08983 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hps1O08983 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hps1O08983 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Mir770-201ENSMUST00000103252 94 ntBASIC14.32□□□□□ -0.12
Hps1O08983 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Gm5864-201ENSMUST00000202263 970 ntBASIC14.32□□□□□ -0.12
Hps1O08983 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.32□□□□□ -0.12
Hps1O08983 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Hps1O08983 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hps1O08983 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.32□□□□□ -0.12
Hps1O08983 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.32□□□□□ -0.12
Hps1O08983 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hps1O08983 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.31□□□□□ -0.12
Hps1O08983 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.31□□□□□ -0.12
Hps1O08983 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
Hps1O08983 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hps1O08983 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.31□□□□□ -0.12
Hps1O08983 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hps1O08983 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hps1O08983 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.31□□□□□ -0.12
Hps1O08983 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms