Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf11bO08712 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf11bO08712 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Gm15372-201ENSMUST00000120729 834 ntBASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf11bO08712 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Gm8344-201ENSMUST00000119813 856 ntBASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf11bO08712 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Gm27357-201ENSMUST00000183754 135 ntBASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf11bO08712 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms