Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh11xF6ZNL5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdh11xF6ZNL5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh11xF6ZNL5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh11xF6ZNL5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Pcdh11xF6ZNL5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh11xF6ZNL5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Gm13418-201ENSMUST00000119097 944 ntBASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh11xF6ZNL5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Gm2651-201ENSMUST00000203560 838 ntBASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh11xF6ZNL5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms