Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc85cE9Q6B2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Gm9522-201ENSMUST00000182394 926 ntBASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Gm5035-201ENSMUST00000215581 927 ntBASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc85cE9Q6B2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Gm9719-201ENSMUST00000162765 543 ntBASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc85cE9Q6B2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Mir6392-201ENSMUST00000184924 108 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Gm46209-201ENSMUST00000217912 553 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Gm18624-201ENSMUST00000220966 658 ntBASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc85cE9Q6B2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Gm5566-201ENSMUST00000116118 459 ntBASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc85cE9Q6B2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms