Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Gm17968-201ENSMUST00000194902 784 ntBASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Mir8117-201ENSMUST00000184773 107 ntBASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb9E9Q5G2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb9E9Q5G2 Gm4995-201ENSMUST00000117247 432 ntBASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Gm10175-201ENSMUST00000086013 645 ntBASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb9E9Q5G2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Mir3113-201ENSMUST00000175478 76 ntBASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb9E9Q5G2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb9E9Q5G2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms