Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Gm37153-201ENSMUST00000193637 231 ntBASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Gm18195-201ENSMUST00000207604 706 ntBASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cpsf4lE9Q2N0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Mir5131-201ENSMUST00000175426 93 ntBASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4lE9Q2N0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 AV026068-213ENSMUST00000223675 1171 ntBASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Mzt1-203ENSMUST00000227948 952 ntBASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4lE9Q2N0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4lE9Q2N0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4lE9Q2N0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4lE9Q2N0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4lE9Q2N0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4lE9Q2N0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4lE9Q2N0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4lE9Q2N0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms