Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Gm25911-201ENSMUST00000157621 56 ntBASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm23935-201ENSMUST00000102303 57 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm24270-201ENSMUST00000102326 57 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm14822-201ENSMUST00000122247 291 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm24245-201ENSMUST00000157318 57 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm27300-201ENSMUST00000184085 97 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm27335-201ENSMUST00000184758 97 ntBASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh17E9PXF0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh17E9PXF0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh17E9PXF0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh17E9PXF0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms