Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Mir877-201ENSMUST00000104738 85 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm27514-201ENSMUST00000183692 110 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm43947-201ENSMUST00000203019 959 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm9823-201ENSMUST00000051212 327 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Gm6013-201ENSMUST00000212264 699 ntBASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col6a3E9PWQ3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col6a3E9PWQ3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col6a3E9PWQ3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col6a3E9PWQ3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col6a3E9PWQ3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Gm22018-201ENSMUST00000104357 131 ntBASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Gm43118-201ENSMUST00000199149 775 ntBASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col6a3E9PWQ3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Mir1894-201ENSMUST00000122802 81 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm43822-201ENSMUST00000200285 476 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm17794-201ENSMUST00000220252 955 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm45930-201ENSMUST00000221330 292 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms