Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Gm45059-201ENSMUST00000205558 1077 ntBASIC21.38■■□□□ 1.01
Hfm1D3Z4R1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Gm45195-201ENSMUST00000205597 1008 ntBASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hfm1D3Z4R1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hfm1D3Z4R1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Gm15653-201ENSMUST00000119247 907 ntBASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Dupd1-202ENSMUST00000224735 548 ntBASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC21.35■■□□□ 1.01
Hfm1D3Z4R1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC21.34■■□□□ 1.01
Hfm1D3Z4R1 Gm45384-201ENSMUST00000210451 277 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms