Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Mir6979-201ENSMUST00000183927 56 ntBASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Gm38266-201ENSMUST00000194931 421 ntBASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Gm18307-201ENSMUST00000206864 949 ntBASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Hmcn1D3YXG0 Zscan30-202ENSMUST00000224144 1458 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm43118-201ENSMUST00000199149 775 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm45930-201ENSMUST00000221330 292 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 AC154687.2-201ENSMUST00000223853 640 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm44207-201ENSMUST00000204568 1424 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm8463-201ENSMUST00000208573 613 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm7390-201ENSMUST00000212452 1216 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm37121-201ENSMUST00000192219 2556 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm13047-201ENSMUST00000117116 815 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 n-R5s14-201ENSMUST00000122688 107 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm4819-201ENSMUST00000182170 1009 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm5354-201ENSMUST00000182417 973 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm5953-201ENSMUST00000220644 2616 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Gm38000-201ENSMUST00000192390 1215 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Cts7-204ENSMUST00000225321 1257 ntBASIC4.38□□□□□ -1.71
Hmcn1D3YXG0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms