Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rfx8D3YU81 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx8D3YU81 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Gm7862-201ENSMUST00000121461 292 ntBASIC16.34■□□□□ 0.21
Rfx8D3YU81 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.34■□□□□ 0.21
Rfx8D3YU81 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx8D3YU81 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx8D3YU81 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx8D3YU81 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx8D3YU81 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx8D3YU81 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Gm11452-201ENSMUST00000122376 690 ntBASIC16.33■□□□□ 0.2
Rfx8D3YU81 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Gm6089-201ENSMUST00000197666 938 ntBASIC16.33■□□□□ 0.2
Rfx8D3YU81 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Gm18195-201ENSMUST00000207604 706 ntBASIC16.33■□□□□ 0.2
Rfx8D3YU81 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.33■□□□□ 0.2
Rfx8D3YU81 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfx8D3YU81 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx8D3YU81 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Gm14722-201ENSMUST00000118943 689 ntBASIC16.32■□□□□ 0.2
Rfx8D3YU81 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.32■□□□□ 0.2
Rfx8D3YU81 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rfx8D3YU81 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.32■□□□□ 0.2
Rfx8D3YU81 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.32■□□□□ 0.2
Rfx8D3YU81 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx8D3YU81 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms