Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Gm5186-201ENSMUST00000218781 920 ntBASIC17.81■□□□□ 0.44
Clrn2B2RVW2 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn2B2RVW2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Gm27430-201ENSMUST00000184585 107 ntBASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Gm44333-201ENSMUST00000197168 107 ntBASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn2B2RVW2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Gm6973-201ENSMUST00000117080 721 ntBASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.79■□□□□ 0.44
Clrn2B2RVW2 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.79■□□□□ 0.44
Clrn2B2RVW2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clrn2B2RVW2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clrn2B2RVW2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms