Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc22a28B2RT89 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gm8344-201ENSMUST00000119813 856 ntBASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc22a28B2RT89 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Gm23634-201ENSMUST00000175071 91 ntBASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc22a28B2RT89 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms