Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn7aB1AYL1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scn7aB1AYL1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Gm22189-201ENSMUST00000103822 86 ntBASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Mir8102-201ENSMUST00000184148 139 ntBASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn7aB1AYL1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Scn7aB1AYL1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gm11424-201ENSMUST00000121929 829 ntBASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.65■□□□□ 0.74
Scn7aB1AYL1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.64■□□□□ 0.74
Scn7aB1AYL1 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.64■□□□□ 0.74
Scn7aB1AYL1 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Scn7aB1AYL1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn7aB1AYL1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms