Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dupd1-202ENSMUST00000224735 548 ntBASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Gm5566-201ENSMUST00000116118 459 ntBASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col4a6B1AVK5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.68■□□□□ 0.1
Col4a6B1AVK5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Gm2451-201ENSMUST00000199447 999 ntBASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Gm10290-201ENSMUST00000200451 999 ntBASIC15.68■□□□□ 0.1
Col4a6B1AVK5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Syt7-205ENSMUST00000224135 1557 ntBASIC15.68■□□□□ 0.1
Col4a6B1AVK5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Gm9794-201ENSMUST00000202370 423 ntBASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Shd-206ENSMUST00000225145 998 ntBASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col4a6B1AVK5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.66■□□□□ 0.1
Col4a6B1AVK5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col4a6B1AVK5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms