Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.7□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Igkv8-27A0A0G2JF28 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gm13186-201ENSMUST00000118031 316 ntBASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.68□□□□□ -0.86
Igkv8-27A0A0G2JF28 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Igkv8-27A0A0G2JF28 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms