Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6n-6A0A075B6B2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm11336-201ENSMUST00000118168 334 ntBASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.54□□□□□ -0.56
Trav6n-6A0A075B6B2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms