Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Gm29257-201ENSMUST00000186115 639 ntBASIC12.27□□□□□ -0.45
Trav17A0A075B655 Gm37055-201ENSMUST00000191866 133 ntBASIC12.27□□□□□ -0.45
Trav17A0A075B655 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.27□□□□□ -0.45
Trav17A0A075B655 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.27□□□□□ -0.45
Trav17A0A075B655 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav17A0A075B655 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm13559-201ENSMUST00000120476 863 ntBASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm22240-201ENSMUST00000175225 82 ntBASIC12.26□□□□□ -0.45
Trav17A0A075B655 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm18959-201ENSMUST00000208954 655 ntBASIC12.26□□□□□ -0.45
Trav17A0A075B655 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Gm7367-201ENSMUST00000057611 492 ntBASIC12.26□□□□□ -0.45
Trav17A0A075B655 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav17A0A075B655 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.25□□□□□ -0.45
Trav17A0A075B655 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.25□□□□□ -0.45
Trav17A0A075B655 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.25□□□□□ -0.45
Trav17A0A075B655 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms