Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-4A0A075B654 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Gm7291-201ENSMUST00000199147 382 ntBASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-4A0A075B654 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms