Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav13-2A0A075B649 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13-2A0A075B649 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13-2A0A075B649 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Trav13-2A0A075B649 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Gm30025-201ENSMUST00000218555 728 ntBASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Gm10812-201ENSMUST00000099864 546 ntBASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 BC037039-201ENSMUST00000192003 2205 ntBASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13-2A0A075B649 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.38□□□□□ -0.75
Trav13-2A0A075B649 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav13-2A0A075B649 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms