Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Gm7461-201ENSMUST00000058918 827 ntBASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9-2A0A075B647 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9-2A0A075B647 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav9-2A0A075B647 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9-2A0A075B647 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm25990-201ENSMUST00000102440 86 ntBASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9-2A0A075B647 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9-2A0A075B647 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav9-2A0A075B647 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms