Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm7367-201ENSMUST00000057611 492 ntBASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm43799-201ENSMUST00000201845 579 ntBASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms