Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav7n-4A0A075B620 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav7n-4A0A075B620 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav7n-4A0A075B620 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms